The mega items activation is not applying to "Reload Speed Upgrade" as it applies to most other weapon augs.
This is happening to me as well.
At first Mega Items wouldn't affect sniper ammo, atm it doesn't work on plasma rifle ammo.
The new 1.2.630.0 trainer isn't activating for me at all. I'm using the Steam version of the game and yes it's patched. I only got the 1.2.630.0 trainer because I noticed the old one wasn't working anymore. This one's not either.
Possibly two patches were pushed through Steam in the same day?
[Edited by lucyblue, 9/16/2011 1:55:51 AM]
For some reason I had to run the trainer as administrator... This's the first time I've had to do that with a CH trainer, let alone the DXHR trainer.